Package: geostan 0.8.1
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geostan: Bayesian Spatial Analysis
For spatial data analysis; provides exploratory spatial analysis tools, spatial regression, spatial econometric, and disease mapping models, model diagnostics, and special methods for inference with small area survey data (e.g., the America Community Survey (ACS)) and censored population health monitoring data. Models are pre-specified using the Stan programming language, a platform for Bayesian inference using Markov chain Monte Carlo (MCMC). References: Carpenter et al. (2017) <doi:10.18637/jss.v076.i01>; Donegan (2021) <doi:10.31219/osf.io/3ey65>; Donegan (2022) <doi:10.21105/joss.04716>; Donegan, Chun and Hughes (2020) <doi:10.1016/j.spasta.2020.100450>; Donegan, Chun and Griffith (2021) <doi:10.3390/ijerph18136856>; Morris et al. (2019) <doi:10.1016/j.sste.2019.100301>.
Authors:
geostan_0.8.1.tar.gz
geostan_0.8.1.zip(r-4.5)geostan_0.8.1.zip(r-4.4)geostan_0.8.1.zip(r-4.3)
geostan_0.8.1.tgz(r-4.5-arm64)geostan_0.8.1.tgz(r-4.4-arm64)geostan_0.8.1.tgz(r-4.3-arm64)
geostan_0.8.1.tar.gz(r-4.5-noble)geostan_0.8.1.tar.gz(r-4.4-noble)
geostan.pdf |geostan.html✨
geostan/json (API)
NEWS
# Install 'geostan' in R: |
install.packages('geostan', repos = c('https://connordonegan.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/connordonegan/geostan/issues
Pkgdown site:https://connordonegan.github.io
- sentencing - Florida state prison sentencing counts by county, 1905-1910
bayesianbayesian-inferencebayesian-statisticsepidemiologymodelingpublic-healthrspatialspatialstancpp
Last updated 2 months agofrom:dd2a62a5ea. Checks:1 OK, 7 WARNING. Indexed: yes.
Target | Result | Latest binary |
---|---|---|
Doc / Vignettes | OK | Feb 14 2025 |
R-4.5-win-x86_64 | WARNING | Feb 14 2025 |
R-4.5-mac-aarch64 | WARNING | Feb 14 2025 |
R-4.5-linux-x86_64 | WARNING | Feb 14 2025 |
R-4.4-win-x86_64 | WARNING | Feb 14 2025 |
R-4.4-mac-aarch64 | WARNING | Feb 14 2025 |
R-4.3-win-x86_64 | WARNING | Feb 14 2025 |
R-4.3-mac-aarch64 | WARNING | Feb 14 2025 |
Exports:apleauto_gaussiandicedgeseigen_gridexpected_mcgamma2get_shpgrhsimpactslglisalog_likmake_EVmcme_diagmoran_plotn_effn_nbsnormalposterior_predictprep_car_dataprep_car_data2prep_icar_dataprep_me_dataprep_sar_dataprep_sar_data2row_standardizese_logshape2matsim_sarsp_diagspatialspillstan_carstan_esfstan_glmstan_icarstan_sarstudent_tuniformwaic
Dependencies:abindbackportsBHbootcallrcheckmateclassclassIntclicolorspaceDBIdeldirdescdistributionale1071fansifarvergenericsggplot2gluegridExtragtableinlineisobandKernSmoothlabelinglatticelifecycleloomagrittrMASSMatrixmatrixStatsmgcvmunsellnlmenumDerivpillarpkgbuildpkgconfigposteriorprocessxproxypsQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstanrstantoolss2scalessfsignsspspDataspdepStanHeaderstensorAtibbletruncnormunitsutf8vctrsviridisLitewithrwk
Custom spatial models with RStan and geostan
Rendered fromcustom-spatial-models.Rmd
usingknitr::rmarkdown
on Feb 14 2025.Last update: 2024-11-15
Started: 2023-10-04
Exploratory spatial data analysis
Rendered frommeasuring-sa.Rmd
usingknitr::rmarkdown
on Feb 14 2025.Last update: 2024-11-16
Started: 2021-01-06
Raster regression
Rendered fromraster-regression.Rmd
usingknitr::rmarkdown
on Feb 14 2025.Last update: 2024-12-04
Started: 2023-05-01
Spatial analysis with geostan
Rendered fromspatial-analysis.Rmd
usingknitr::rmarkdown
on Feb 14 2025.Last update: 2024-11-21
Started: 2024-10-31
Spatial measurement error models
Rendered fromspatial-me-models.Rmd
usingknitr::rmarkdown
on Feb 14 2025.Last update: 2024-11-16
Started: 2021-09-14
Spatial weights matrix
Rendered fromspatial-weights-matrix.Rmd
usingknitr::rmarkdown
on Feb 14 2025.Last update: 2024-06-02
Started: 2024-05-09
Readme and manuals
Help Manual
Help page | Topics |
---|---|
The geostan R package. | geostan-package geostan |
Edge list | edges |
Expected value of the residual Moran coefficient | expected_mc |
Prepare data for spatial filtering | make_EV |
The Moran coefficient (Moran's I) | mc |
Moran scatter plot | moran_plot |
Sample from the posterior predictive distribution | posterior_predict |
Florida state prison sentencing counts by county, 1905-1910 | sentencing |
Create spatial and space-time connectivity matrices | shape2mat |
Spatial filtering | stan_esf |
Intrinsic autoregressive models | stan_icar |
Model comparison | dic waic |