Package: geostan 0.6.2

geostan: Bayesian Spatial Analysis

For spatial data analysis; provides exploratory spatial analysis tools, spatial regression models, disease mapping models, model diagnostics, and special methods for inference with small area survey data (e.g., the America Community Survey (ACS)) and censored population health surveillance data. Models are pre-specified using the Stan programming language, a platform for Bayesian inference using Markov chain Monte Carlo (MCMC). References: Carpenter et al. (2017) <doi:10.18637/jss.v076.i01>; Donegan (2021) <doi:10.31219/osf.io/3ey65>; Donegan (2022) <doi:10.21105/joss.04716>; Donegan, Chun and Hughes (2020) <doi:10.1016/j.spasta.2020.100450>; Donegan, Chun and Griffith (2021) <doi:10.3390/ijerph18136856>; Morris et al. (2019) <doi:10.1016/j.sste.2019.100301>.

Authors:Connor Donegan [aut, cre], Mitzi Morris [ctb], Amy Tims [ctb]

geostan_0.6.2.tar.gz
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geostan.pdf |geostan.html
geostan/json (API)
NEWS

# Install 'geostan' in R:
install.packages('geostan', repos = c('https://connordonegan.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/connordonegan/geostan/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:
  • sentencing - Florida state prison sentencing counts by county, 1905-1910

On CRAN:

bayesianbayesian-inferencebayesian-statisticsepidemiologymodelingpublic-healthrspatialspatialstan

39 exports 61 stars 3.76 score 70 dependencies 30 scripts 950 downloads

Last updated 29 days agofrom:c330dfcf72. Checks:OK: 1 WARNING: 8. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 20 2024
R-4.5-win-x86_64WARNINGAug 20 2024
R-4.5-linux-x86_64WARNINGAug 20 2024
R-4.4-win-x86_64WARNINGAug 20 2024
R-4.4-mac-aarch64WARNINGAug 20 2024
R-4.4-mac-x86_64WARNINGJul 18 2024
R-4.3-win-x86_64WARNINGAug 20 2024
R-4.3-mac-aarch64WARNINGAug 20 2024
R-4.3-mac-x86_64WARNINGJul 18 2024

Exports:apleauto_gaussianedgeseigen_gridexpected_mcgamma2get_shpgrhslglisamake_EVmcme_diagmoran_plotn_effn_nbsnormalposterior_predictprep_car_dataprep_car_data2prep_icar_dataprep_me_dataprep_sar_dataprep_sar_data2row_standardizese_logshape2matsim_sarsp_diagspatialstan_carstan_esfstan_glmstan_icarstan_sarstudent_tuniformwaic

Dependencies:abindbackportsBHbootcallrcheckmateclassclassIntclicolorspaceDBIdeldirdescdistributionale1071fansifarvergenericsggplot2gluegridExtragtableinlineisobandKernSmoothlabelinglatticelifecycleloomagrittrMASSMatrixmatrixStatsmgcvmunsellnlmenumDerivpillarpkgbuildpkgconfigposteriorprocessxproxypsQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstanrstantoolss2scalessfsignsspspDataspdepStanHeaderstensorAtibbletruncnormunitsutf8vctrsviridisLitewithrwk

Custom spatial models with RStan and geostan

Rendered fromcustom-spatial-models.Rmdusingknitr::rmarkdownon Aug 20 2024.

Last update: 2024-03-26
Started: 2023-10-04

Exploratory spatial data analysis

Rendered frommeasuring-sa.Rmdusingknitr::rmarkdownon Aug 20 2024.

Last update: 2024-05-09
Started: 2021-01-06

Raster regression

Rendered fromraster-regression.Rmdusingknitr::rmarkdownon Aug 20 2024.

Last update: 2024-03-01
Started: 2023-05-01

Spatial measurement error models

Rendered fromspatial-me-models.Rmdusingknitr::rmarkdownon Aug 20 2024.

Last update: 2024-03-01
Started: 2021-09-14

Spatial weights matrix

Rendered fromspatial-weights-matrix.Rmdusingknitr::rmarkdownon Aug 20 2024.

Last update: 2024-06-02
Started: 2024-05-09